| Stage | Winner | Time | Avg.speed |
| CS1 |
| Cheetah Anza - Isha 1 |
2.42 km |
| Kankkunen, Juha | 1m 53,4s |
76.83 km/h |
| CS2 |
| Isinya - Orien 1 |
112.40 km |
| Burns, Richard | 48m 25,7s |
139.26 km/h |
| CS3 |
| Olooloitikosh - Kajiado 1 |
49.06 km |
| Sainz, Carlos | 22m 38,7s |
129.99 km/h |
| CS4 |
| Hunters Lookout - Timbuctoo |
72.56 km |
| Burns, Richard | 36m 11,0s |
120.32 km/h |
| CS5 |
| Lenkili - Il Bisel 1 |
113.41 km |
| Makinen, Tommi | 59m 57,3s |
113.50 km/h |
| CS6 |
| Elmenteita - Olenguruone |
89.13 km |
| Burns, Richard | 42m 56,2s |
124.55 km/h |
| CS7 |
| Nyaru - Eldama Ravine |
87.59 km |
| Auriol, Didier | 56m 15,9s |
93.40 km/h |
| CS8 |
| Morendat - Mbaruk |
81.40 km |
| Makinen, Tommi | 41m 03,0s |
118.98 km/h |
| CS9 |
| Marigat - Gari Ya Moshi |
124.65 km |
| Sainz, Carlos | 1h 01m 03,9s |
122.48 km/h |
| CS10 |
| Lenkili - Il Bisel 2 |
113.41 km |
| Auriol, Didier | 1h 00m 22,4s |
112.71 km/h |
| CS11 |
| Isinya - Orien 2 |
112.40 km |
| Duncan, Ian | 50m 22,7s |
133.87 km/h |
| CS12 |
| Olooloitikosh - Kajiado 2 |
49.06 km |
| Makinen, Tommi | 22m 59,7s |
128.01 km/h |
| CS13 |
| Cheetah Anza - Isha 2 |
2.42 km |
| Sainz, Carlos | 1m 56,9s |
74.53 km/h |
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